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Plant microbiota and agroecological management

Plant microbiota and agroecological management

In recent years, microbiome research has revolutionized our understanding of plant life. We no longer speak of individual microorganisms acting in isolation, but of true microbial communities that coexist and collaborate with plants and soil, contributing to their well-being. Just like humans, plants also host a microbiota: a collection of bacteria, fungi, and other microorganisms that live in the roots, leaves, and within plant tissues.
These microorganisms are not simple “hosts,” but active partners that help the plant absorb nutrients and water, defend itself from pathogens, and better adapt to the environment. Each plant, based on its genotype, selects the microbial community best suited to its needs. In return, the microbiota regulates important physiological processes, such as growth and stress resistance.
In recent decades, however, agricultural selection has favored productive plant varieties that are less capable of interacting with their own natural microorganisms. This may explain why many modern crops are more sensitive to environmental changes and more dependent on fertilizers and pesticides. Conversely, heirloom or poorly selected varieties often maintain a richer and more diverse microbiota, which can improve soil health and crop sustainability.

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Indeed, it has been shown that soils managed with agroecological or sustainable practices possess a more diverse and stable microbiota than those treated with conventional methods. This translates into healthier plants, more fertile soils, and a greater capacity to adapt to climate change.
In recent years, efforts have been made to “help” plants by introducing beneficial microorganisms into the soil in the form of inoculants or biofertilizers. These include, for example, nitrogen-fixing bacteria, mycorrhizal fungi, or microorganisms that stimulate plant growth and defense. These products can work very well, especially in poor or degraded soils, but they don’t always adapt to the existing microbiota. Often, the introduced inoculants struggle to establish themselves or compete with local microbial communities, reducing their effectiveness.
For this reason, today there is a tendency to move beyond the logic of external additions and promote a more integrated and systemic approach: the management of the soil and plant microbiota. Rather than replacing microorganisms, the goal is to foster the conditions that allow the natural microbiota to thrive and perform its functions optimally.
Microbial communities not only indicate soil health, but can also be active tools for its recovery and improved agricultural productivity. Understanding how they interact with each other and with the chemical and physical characteristics of the soil is key to developing new regenerative agriculture practices: an agriculture that goes beyond simply producing crops, but also regenerates soil fertility and reduces dependence on chemical inputs.
From this perspective, the microbiota becomes a truly invisible ally, capable of guiding agriculture toward a more efficient, sustainable future, in balance with nature.

Guido Bissanti




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